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Deep convolutional encoder-decoders with aggregated multi-resolution skip connections for skin lesion segmentation

The prevalence of skin melanoma is rapidly increasing as well as the recorded death cases of its patients. Automatic image segmentation tools play an important role in providing standardized computer-assisted analysis for skin melanoma patients. Current state-of-the-art segmentation methods are based on fully convolutional neural networks, which utilize an encoder-decoder approach. However, these

Artificial Intelligence

AmpliconNet: Sequence Based Multi-layer Perceptron for Amplicon Read Classification Using Real-time Data Augmentation

Taxonomic assignment is the core of targeted metagenomics approaches that aims to assign sequencing reads to their corresponding taxonomy. Sequence similarity searching and machine learning (ML) are two commonly used approaches for taxonomic assignment based on the 16S rRNA. Similarity based approaches require high computation resources, while ML approaches dont need these resources in prediction

Artificial Intelligence
Healthcare

Evaluation of computational techniques for predicting non-synonymous single nucleotide variants pathogenicity

The human genetic diseases associated with many factors, one of these factors is the non-synonymous Single Nucleotide Variants (nsSNVs) cause single amino acid change with another resulting in protein function change leading to disease. Many computational techniques have been released to expect the impacts of amino acid alteration on protein function and classify mutations as pathogenic or neutral

Artificial Intelligence
Healthcare

Automated Cell-Type Classification and Death-Detection of Spinal Motoneurons

Spinal motoneurons (MNs) play a crucial role in movement control. Decoding the firing activity of spinal MNs could help in real-life challenges, such as enhancing the control of myoelectric prostheses and diagnosing neurodegenerative diseases. In this paper, we propose a machine learning approach to automatically classify MNs based on their firing activity. Applying the proposed approach to data

Artificial Intelligence
Healthcare

The H3ABioNet helpdesk: An online bioinformatics resource, enhancing Africa's capacity for genomics research

Background: Currently, formal mechanisms for bioinformatics support are limited. The H3Africa Bioinformatics Network has implemented a public and freely available Helpdesk (HD), which provides generic bioinformatics support to researchers through an online ticketing platform. The following article reports on the H3ABioNet HD (H3A-HD)'s development, outlining its design, management, usage and

Artificial Intelligence

Extreme Points Derived Confidence Map as a Cue for Class-Agnostic Interactive Segmentation Using Deep Neural Network

To automate the process of segmenting an anatomy of interest, we can learn a model from previously annotated data. The learning-based approach uses annotations to train a model that tries to emulate the expert labeling on a new data set. While tremendous progress has been made using such approaches, labeling of medical images remains a time-consuming and expensive task. In this paper, we evaluate

Artificial Intelligence
Healthcare
Software and Communications

Bioinformatics functional analysis of let-7a, miR-34a, and miR-199a/b reveals novel insights into immune system pathways and cancer hallmarks for hepatocellular carcinoma

Let-7a, miR-34a, and miR-199 a/b have gained a great attention as master regulators for cellular processes. In particular, these three micro-RNAs act as potential onco-suppressors for hepatocellular carcinoma. Bioinformatics can reveal the functionality of these micro-RNAs through target prediction and functional annotation analysis. In the current study, in silico analysis using innovative

Healthcare

Emotional tone detection in Arabic tweets

Emotion detection in Arabic text is an emerging research area, but the efforts in this new field have been hindered by the very limited availability of Arabic datasets annotated with emotions. In this paper, we review work that has been carried out in the area of emotion analysis in Arabic text. We then present an Arabic tweet dataset that we have built to serve this task. The efforts and

Artificial Intelligence

Predicting all star player in the national basketball association using random forest

National Basketball Association (NBA) All Star Game is a demonstration game played between the selected Western and Eastern conference players. The selection of players for the NBA All Star game purely depends on votes. The fans and coaches vote for the players and decide who is going to make the All Star roster. A player who continues to receive enough votes in following years will play more All

Artificial Intelligence

A New Web Deception System Framework

Web applications have many vulnerabilities that allow attackers to compromise sensitive data and gain unauthorized access to the production web servers. Compromised web-sessions represent a major threat. Current random attacks draw attention to the need for new protection and detection tools. In this paper, we propose a web deception scheme to mitigate web attacks in the production web site. The

Artificial Intelligence